MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,317
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 47
misc RNA:
Total features: 2,368
Total number of protein coding genes annotated/found:
2,317
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5039|JADGLG010000064.1
SEQF5039_01854
Genome Viewer
NA
AA
435/145
913-479
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01855
Genome Viewer
NA
AA
684/228
1128-1811
Ribulose-phosphate 3-epimerase
SEQF5039|JADGLG010000064.1
SEQF5039_01856
Genome Viewer
NA
AA
534/178
2625-2092
Inorganic pyrophosphatase
SEQF5039|JADGLG010000064.1
SEQF5039_01857
Genome Viewer
NA
AA
1410/470
2861-4270
Replicative DNA helicase
SEQF5039|JADGLG010000064.1
SEQF5039_01858
Genome Viewer
NA
AA
669/223
4554-5222
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01859
Genome Viewer
NA
AA
678/226
5338-6015
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01860
Genome Viewer
NA
AA
903/301
6035-6937
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01861
Genome Viewer
NA
AA
519/173
6913-7431
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01862
Genome Viewer
NA
AA
462/154
7439-7900
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01863
Genome Viewer
NA
AA
642/214
8746-8105
3-isopropylmalate dehydratase small subunit 1
SEQF5039|JADGLG010000064.1
SEQF5039_01864
Genome Viewer
NA
AA
135/45
8956-8822
hypothetical protein
SEQF5039|JADGLG010000064.1
SEQF5039_01865
Genome Viewer
NA
AA
1539/513
10625-9087
3-isopropylmalate dehydratase large subunit
SEQF5039|JADGLG010000002.1
SEQF5039_00890
Genome Viewer
NA
AA
204/68
359-562
hypothetical protein
SEQF5039|JADGLG010000002.1
SEQF5039_00891
Genome Viewer
NA
AA
555/185
781-1335
Aldose sugar dehydrogenase YliI
SEQF5039|JADGLG010000002.1
SEQF5039_00892
Genome Viewer
NA
AA
420/140
1290-1709
Aldose sugar dehydrogenase YliI
SEQF5039|JADGLG010000002.1
SEQF5039_00893
Genome Viewer
NA
AA
777/259
1810-2586
Type-2 restriction enzyme DpnI
SEQF5039|JADGLG010000002.1
SEQF5039_00894
Genome Viewer
NA
AA
1431/477
2647-4077
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
SEQF5039|JADGLG010000002.1
SEQF5039_00895
Genome Viewer
NA
AA
2154/718
6759-4606
Bifunctional (p)ppGpp synthase/hydrolase SpoT
SEQF5039|JADGLG010000002.1
SEQF5039_00896
Genome Viewer
NA
AA
207/69
6984-6778
DNA-directed RNA polymerase subunit omega
SEQF5039|JADGLG010000002.1
SEQF5039_00897
Genome Viewer
NA
AA
618/206
7676-7059
Guanylate kinase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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